EnhancerDB
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  3. rs539808474[chr12:51764189]
Enhancers that have rs539808474[chr12:51764189]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 51760425 51770795 enh14718
Astrocyte Uterus Blood (T-cell) Stomach Kidney Skin (Keratinocyte) Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs539808474[chr12:51764189]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 51764183 51764195 HES5 JASPAR yes 120884927
chr12 51764183 51764195 HES7 JASPAR yes 120884928
chr12 51764184 51764194 BHLHE40 JASPAR yes 120884929
chr12 51764184 51764194 BHLHE41 JASPAR yes 120884930
chr12 51764184 51764194 CLOCK JASPAR yes 120884931
chr12 51764184 51764194 HEY1 JASPAR yes 120884932
chr12 51764184 51764194 HEY2 JASPAR yes 120884933
chr12 51764184 51764194 MAX JASPAR yes 120884934
chr12 51764184 51764194 MLXIPL JASPAR yes 120884935
chr12 51764184 51764194 MLX JASPAR yes 120884936
chr12 51764184 51764194 MNT JASPAR yes 120884937
chr12 51764184 51764194 TFE3 JASPAR yes 120884938
chr12 51764184 51764194 TFEB JASPAR yes 120884939
chr12 51764184 51764194 TFEC JASPAR yes 120884940
chr12 51764186 51764191 MYC TRANSFAC yes 120884941
chr12 51764186 51764191 USF1 TRANSFAC yes 120884942
chr12 51764186 51764191 USF2 TRANSFAC yes 120884943
Genes associated with rs539808474[chr12:51764189], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More