EnhancerDB
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  3. rs539813038[chr1:235110256]
Enhancers that have rs539813038[chr1:235110256]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs539813038[chr1:235110256]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235110060 235110384 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402086
chr1 235110099 235110411 ZNF274 GTRD no Cervix (HeLa-S3) 21402087
chr1 235110106 235110406 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21402088
chr1 235110237 235110257 RREB1 JASPAR yes 36336970
chr1 235110239 235110259 RREB1 JASPAR yes 36336971
chr1 235110241 235110261 RREB1 JASPAR yes 36336972
chr1 235110243 235110263 RREB1 JASPAR yes 36336973
Genes associated with rs539813038[chr1:235110256], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More