EnhancerDB
  1. Home
  2. SNP
  3. rs539827208[chr13:113378548]
Enhancers that have rs539827208[chr13:113378548]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr13 113356925 113401095 enh15512
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs539827208[chr13:113378548]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr13 113378535 113378549 NR2F1 JASPAR yes 60430421
chr13 113378545 113378554 NKX2-8 JASPAR yes 60430422
chr13 113378545 113378555 NKX2-3 JASPAR yes 60430423
Genes associated with rs539827208[chr13:113378548], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More