EnhancerDB
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  3. rs539868780[chr1:8769309]
Enhancers that have rs539868780[chr1:8769309]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8756385 8790235 enh11474
Brain (SK-N-MC) Astrocyte Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs539868780[chr1:8769309]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8769292 8769313 IRF1 JASPAR yes 26589542
chr1 8769293 8769314 IRF1 JASPAR yes 26589545
chr1 8769294 8769315 IRF1 JASPAR yes 26589546
chr1 8769309 8769313 TEAD2 TRANSFAC yes 26589547
chr1 8769309 8769314 TBP TRANSFAC yes 26589548
chr1 8769309 8769315 TFIID TRANSFAC yes 26589549
Genes associated with rs539868780[chr1:8769309], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More