EnhancerDB
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  3. rs539878231[chr6:16403360]
Enhancers that have rs539878231[chr6:16403360]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16389708 16416819 enh8977
Skin (Keratinocyte) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs539878231[chr6:16403360]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16403345 16403365 TP63 JASPAR yes 100297351
chr6 16403346 16403364 TP53 JASPAR yes 100297352
chr6 16403346 16403364 TP63 JASPAR yes 100297353
chr6 16403346 16403364 TP73 JASPAR yes 100297354
chr6 16403347 16403362 TP53 JASPAR yes 100297355
chr6 16403347 16403367 TP53 JASPAR yes 100297356
chr6 16403348 16403363 TP53 JASPAR yes 100297357
Genes associated with rs539878231[chr6:16403360], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More