EnhancerDB
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  3. rs539882296[chr12:125228371]
Enhancers that have rs539882296[chr12:125228371]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs539882296[chr12:125228371]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125228200 125228845 P63 GTRD no Skin (Keratinocyte) 21582581
chr12 125228331 125228985 ZNF274 GTRD no Bone Marrow (K562) 21582582
chr12 125228363 125228374 NFE2 JASPAR yes 124416567
chr12 125228364 125228375 FOSL2 JASPAR yes 124416568
Genes associated with rs539882296[chr12:125228371], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More