EnhancerDB
  1. Home
  2. SNP
  3. rs539886792[chr6:16712938]
Enhancers that have rs539886792[chr6:16712938]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16667585 16734115 enh23080
Liver Astrocyte Colon (HCT116) Adrenal Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 16712557 16713382 vista51170
VISTA
Transcript factors that have rs539886792[chr6:16712938]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16712921 16712939 NR3C1 JASPAR yes 70326861
chr6 16712921 16712939 NR3C1 JASPAR yes 100331608
chr6 16712934 16712955 IRF1 JASPAR yes 70326863
chr6 16712934 16712955 IRF1 JASPAR yes 100331610
chr6 16712938 16712950 IRF1 JASPAR yes 70326864
chr6 16712938 16712950 IRF1 JASPAR yes 100331611
Genes associated with rs539886792[chr6:16712938], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More