EnhancerDB
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  3. rs539912078[chr2:102422826]
Enhancers that have rs539912078[chr2:102422826]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 102416803 102440155 enh18762
Brain (SK-N-MC) Liver Astrocyte Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs539912078[chr2:102422826]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 102422822 102422832 TFAP4 JASPAR yes 75841997
chr2 102422824 102422845 IRF1 JASPAR yes 75841998
chr2 102422826 102422841 PRDM1 JASPAR yes 75841999
chr2 102422826 102422841 STAT2 JASPAR yes 75842000
Genes associated with rs539912078[chr2:102422826], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More