EnhancerDB
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  3. rs539948562[chr1:25098980]
Enhancers that have rs539948562[chr1:25098980]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25085286 25108435 enh141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Blood (Karpas-422) Uterus Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs539948562[chr1:25098980]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25098970 25098981 NFIL3 JASPAR yes 27529989
chr1 25098976 25098987 FOXB1 JASPAR yes 27529990
chr1 25098980 25098988 FOXL1 JASPAR yes 27529991
chr1 25098980 25098992 MEF2A JASPAR yes 27529992
chr1 25098980 25098992 MEF2B JASPAR yes 27529993
chr1 25098980 25098992 MEF2D JASPAR yes 27529994
Genes associated with rs539948562[chr1:25098980], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More