EnhancerDB
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  3. rs540017820[chr1:10114130]
Enhancers that have rs540017820[chr1:10114130]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10113864 10131352 enh11492
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540017820[chr1:10114130]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10114129 10114135 TBP TRANSFAC yes 26697137
chr1 10114129 10114144 FOXP1 JASPAR yes 26697138
Genes associated with rs540017820[chr1:10114130], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More