EnhancerDB
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  3. rs540020766[chr16:81566249]
Enhancers that have rs540020766[chr16:81566249]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 81542851 81638595 enh16838
Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs540020766[chr16:81566249]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 81566243 81566252 ZEB1 JASPAR yes 11840552
chr16 81566244 81566254 FIGLA JASPAR yes 11840553
chr16 81566244 81566254 TCF4 JASPAR yes 11840554
chr16 81566246 81566251 USF2 TRANSFAC yes 11840555
chr16 81566248 81566263 RFX5 JASPAR yes 11840556
Genes associated with rs540020766[chr16:81566249], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More