EnhancerDB
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  3. rs540024962[chr5:14170617]
Enhancers that have rs540024962[chr5:14170617]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 14142745 14193315 enh22052
Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs540024962[chr5:14170617]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 14170605 14170626 IRF1 JASPAR yes 61018398
chr5 14170607 14170622 PRDM1 JASPAR yes 61018399
chr5 14170607 14170628 IRF1 JASPAR yes 61018400
chr5 14170609 14170630 IRF1 JASPAR yes 61018401
chr5 14170611 14170632 IRF1 JASPAR yes 61018402
chr5 14170612 14170627 FOXP1 JASPAR yes 61018403
chr5 14170612 14170633 IRF1 JASPAR yes 61018404
chr5 14170613 14170628 STAT2 JASPAR yes 61018405
chr5 14170613 14170634 IRF1 JASPAR yes 61018406
chr5 14170614 14170629 FOXP1 JASPAR yes 61018407
chr5 14170614 14170635 IRF1 JASPAR yes 61018408
chr5 14170615 14170636 IRF1 JASPAR yes 61018409
chr5 14170616 14170631 FOXP1 JASPAR yes 61018410
chr5 14170617 14170632 FOXP1 JASPAR yes 61018411
Genes associated with rs540024962[chr5:14170617], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More