EnhancerDB
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  3. rs540028229[chr16:81562996]
Enhancers that have rs540028229[chr16:81562996]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 81542851 81638595 enh16838
Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs540028229[chr16:81562996]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 81560516 81563355 ZBTB33 GTRD no Lung (A549) 108209555
chr16 81560546 81564272 ZBTB33 GTRD no Lung (A549) 108209556
chr16 81562984 81563001 ZNF410 JASPAR yes 11840219
chr16 81562990 81563008 ESR2 JASPAR yes 11840220
chr16 81562991 81563009 ESR2 JASPAR yes 11840221
chr16 81562992 81563002 SP1 JASPAR yes 11840222
chr16 81562992 81563007 ESR2 JASPAR yes 11840223
chr16 81562992 81563012 ESR1 JASPAR yes 11840224
Genes associated with rs540028229[chr16:81562996], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More