EnhancerDB
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  3. rs540030229[chr6:37017820]
Enhancers that have rs540030229[chr6:37017820]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 37012585 37032515 enh23198
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 37017809 37018367 vista51778
VISTA
Transcript factors that have rs540030229[chr6:37017820]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 37017817 37017822 SP1 TRANSFAC yes 70355990
chr6 37017817 37017822 SP1 TRANSFAC yes 101379036
chr6 37017818 37017828 ZNF740 JASPAR yes 70355991
chr6 37017818 37017828 ZNF740 JASPAR yes 101379037
chr6 37017819 37017824 TFAP2A TRANSFAC yes 70355992
chr6 37017819 37017824 TFAP2A TRANSFAC yes 101379038
chr6 37017819 37017825 MZF1 JASPAR yes 70355993
chr6 37017819 37017825 MZF1 JASPAR yes 101379039
Genes associated with rs540030229[chr6:37017820], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More