EnhancerDB
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  3. rs540036510[chr17:2795272]
Enhancers that have rs540036510[chr17:2795272]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs540036510[chr17:2795272]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2795162 2796241 ZNF143 GTRD no Epithelial (MCF-7) 21739738
chr17 2795162 2796241 ZNF143 GTRD no Epithelial (MCF-7) 108231313
chr17 2795210 2800120 ZNF143 GTRD no Epithelial (MCF-7) 21739739
chr17 2795210 2800120 ZNF143 GTRD no Epithelial (MCF-7) 108231314
chr17 2795258 2795278 TP63 JASPAR yes 52783233
chr17 2795259 2795277 TP73 JASPAR yes 52783237
chr17 2795269 2795288 PAX5 JASPAR yes 52783238
chr17 2795272 2795281 HIC2 JASPAR yes 52783239
Genes associated with rs540036510[chr17:2795272], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More