EnhancerDB
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  3. rs540045346[chr14:61578623]
Enhancers that have rs540045346[chr14:61578623]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 61563565 61582555 enh3250
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs540045346[chr14:61578623]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 61577300 61579358 ZNF274 GTRD no Cervix (HeLa-S3) 21621941
chr14 61578077 61579155 ZNF274 GTRD no Cervix (HeLa-S3) 21621948
chr14 61578131 61579127 ZNF274 GTRD no Cervix (HeLa-S3) 21621949
chr14 61578619 61578623 LFA1 TRANSFAC yes 115817217
Genes associated with rs540045346[chr14:61578623], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More