EnhancerDB
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  3. rs540054689[chr11:123043521]
Enhancers that have rs540054689[chr11:123043521]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 123027364 123061967 enh14348
Brain (SK-N-MC) Astrocyte Pancreas Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs540054689[chr11:123043521]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 123043515 123043525 HOXA13 JASPAR yes 42053649
chr11 123043515 123043525 HOXD13 JASPAR yes 42053650
chr11 123043515 123043526 HOXA10 JASPAR yes 42053651
chr11 123043516 123043525 CDX1 JASPAR yes 42053652
Genes associated with rs540054689[chr11:123043521], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More