EnhancerDB
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  3. rs540056019[chr6:34992524]
Enhancers that have rs540056019[chr6:34992524]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 34986593 35008101 enh23172
Astrocyte Adrenal Embryonic Stem Cell Line (H1-hESC) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Lung (A549) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 34992488 34992843 vista51687
VISTA
Transcript factors that have rs540056019[chr6:34992524]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 34992293 34992813 ATF2 UCSC Txn Factor no Conserved 108539819
chr6 34992379 34992699 JUND UCSC Txn Factor no Conserved 108539820
chr6 34992506 34992527 ZNF263 JASPAR yes 70351382
chr6 34992506 34992527 ZNF263 JASPAR yes 101256243
chr6 34992522 34992526 YY1 TRANSFAC yes 70351385
chr6 34992522 34992526 YY1 TRANSFAC yes 101256246
Genes associated with rs540056019[chr6:34992524], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More