EnhancerDB
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  3. rs540059237[chr6:34622571]
Enhancers that have rs540059237[chr6:34622571]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 34618105 34636675 enh9069
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs540059237[chr6:34622571]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 34622558 34622579 IRF1 JASPAR yes 101228732
chr6 34622562 34622577 PRDM1 JASPAR yes 101228733
chr6 34622564 34622585 IRF1 JASPAR yes 101228734
chr6 34622568 34622582 STAT1 JASPAR yes 101228735
chr6 34622568 34622583 STAT2 JASPAR yes 101228736
Genes associated with rs540059237[chr6:34622571], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More