EnhancerDB
  1. Home
  2. SNP
  3. rs540077731[chr2:227506965]
Enhancers that have rs540077731[chr2:227506965]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 227505953 227529050 enh19283
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540077731[chr2:227506965]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 227506961 227506967 ZNF354C JASPAR yes 81477403
chr2 227506964 227506975 USF1 JASPAR yes 81477404
chr2 227506964 227506975 USF2 JASPAR yes 81477405
chr2 227506965 227506975 SREBF2 JASPAR yes 81477406
Genes associated with rs540077731[chr2:227506965], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More