EnhancerDB
  1. Home
  2. SNP
  3. rs540085463[chr1:230259311]
Enhancers that have rs540085463[chr1:230259311]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230237385 230313644 enh12770
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540085463[chr1:230259311]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230258901 230259331 EP300 UCSC Txn Factor no Conserved 107878706
chr1 230258911 230259329 RELA UCSC Txn Factor no Conserved 107878708
chr1 230258929 230259313 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21391487
chr1 230258929 230259313 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107878709
chr1 230258949 230259316 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21391488
chr1 230258949 230259316 EBF1 UCSC Txn Factor no Conserved 107878710
chr1 230258949 230259316 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107878711
chr1 230258976 230259356 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21391489
chr1 230258976 230259356 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107878712
chr1 230258976 230259386 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21391490
chr1 230258976 230259386 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107878713
chr1 230259000 230259330 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21391493
chr1 230259000 230259330 BHLHE40 UCSC Txn Factor no Conserved 107878716
chr1 230259000 230259330 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107878717
chr1 230259002 230259332 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21391494
chr1 230259002 230259332 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107878718
chr1 230259003 230259359 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21391495
chr1 230259003 230259359 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107878719
chr1 230259014 230259334 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21391498
chr1 230259014 230259334 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107878722
chr1 230259015 230259325 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21391499
chr1 230259015 230259325 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107878723
chr1 230259023 230259313 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21391500
chr1 230259023 230259313 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107878724
chr1 230259054 230259350 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21391502
chr1 230259054 230259350 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107878726
chr1 230259078 230259314 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21391503
chr1 230259078 230259314 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107878727
chr1 230259092 230259612 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21391504
chr1 230259092 230259612 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107878728
Genes associated with rs540085463[chr1:230259311], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More