EnhancerDB
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  3. rs540087285[chr17:41528001]
Enhancers that have rs540087285[chr17:41528001]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41518125 41539515 enh17169
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Prostate (RWPE1) Cervix (HeLa-S3) Esophagus Astrocyte Lung (A549) Stomach Placenta Thyroid Adrenal Lung (PC-9) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs540087285[chr17:41528001]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41526227 41528797 ZNF143 GTRD no Epithelial (MCF-7) 21760440
chr17 41526271 41528845 ZNF143 GTRD no Epithelial (MCF-7) 21760441
chr17 41526422 41528904 ZNF143 GTRD no Epithelial (MCF-7) 21760443
chr17 41526590 41528944 ZNF143 GTRD no Epithelial (MCF-7) 21760446
chr17 41526648 41528930 ZNF143 GTRD no Epithelial (MCF-7) 21760447
chr17 41526659 41528889 ZNF143 GTRD no Epithelial (MCF-7) 21760448
chr17 41526714 41528825 ZNF274 GTRD no Liver (HepG2) 21760449
chr17 41526734 41528838 ZNF274 GTRD no Cervix (HeLa-S3) 21760450
chr17 41526767 41528900 ZNF143 GTRD no Epithelial (MCF-7) 21760451
chr17 41527015 41528594 ZNF143 GTRD no Epithelial (MCF-7) 21760475
chr17 41527034 41528918 ZNF274 GTRD no Liver (HepG2) 21760482
chr17 41527037 41528575 ZNF143 GTRD no Epithelial (MCF-7) 21760483
chr17 41527056 41528802 ZNF143 GTRD no Epithelial (MCF-7) 21760485
chr17 41527057 41528600 ZNF143 GTRD no Epithelial (MCF-7) 21760486
chr17 41527077 41528891 ZNF143 GTRD no Epithelial (MCF-7) 21760487
chr17 41527127 41528104 ZBTB33 GTRD no Lung (A549) 21760488
chr17 41527146 41528807 ZNF143 GTRD no Epithelial (MCF-7) 21760489
chr17 41527168 41528819 ZNF274 GTRD no Liver (HepG2) 21760490
chr17 41527190 41528700 ZNF143 GTRD no Epithelial (MCF-7) 21760491
chr17 41527194 41528899 ZNF143 GTRD no Epithelial (MCF-7) 21760492
chr17 41527240 41528841 ZNF274 GTRD no Liver (HepG2) 21760494
chr17 41527252 41528810 ZNF274 GTRD no Liver (HepG2) 21760495
chr17 41527256 41528874 ZNF143 GTRD no Epithelial (MCF-7) 21760496
chr17 41527275 41528759 ZNF274 GTRD no Liver (HepG2) 21760497
chr17 41527315 41528922 ZNF143 GTRD no Epithelial (MCF-7) 21760498
chr17 41527342 41528560 ZBTB33 GTRD no Lung (A549) 21760499
chr17 41527343 41528916 ZNF143 GTRD no Epithelial (MCF-7) 21760500
chr17 41527385 41528820 ZNF143 GTRD no Epithelial (MCF-7) 21760502
chr17 41527431 41531265 ZBTB33 GTRD no Lung (A549) 21760503
chr17 41527479 41528811 ZNF274 GTRD no Liver (HepG2) 21760504
chr17 41527485 41528654 ZNF143 GTRD no Epithelial (MCF-7) 21760505
chr17 41527541 41528743 ZNF143 GTRD no Epithelial (MCF-7) 21760506
chr17 41527556 41529098 ZNF143 GTRD no Epithelial (MCF-7) 21760507
chr17 41527562 41528242 ZNF143 GTRD no Epithelial (MCF-7) 21760508
chr17 41527619 41528885 ZNF143 GTRD no Epithelial (MCF-7) 21760509
chr17 41527673 41528616 ZBTB33 GTRD no Lung (A549) 21760510
chr17 41527686 41528858 ZNF274 GTRD no Liver (HepG2) 21760511
chr17 41527711 41528573 ZNF143 GTRD no Epithelial (MCF-7) 21760512
chr17 41527720 41528562 ZNF274 GTRD no Liver (HepG2) 21760513
chr17 41527733 41528386 ZNF143 GTRD no Epithelial (MCF-7) 21760514
chr17 41527742 41528842 ZNF274 GTRD no Liver (HepG2) 21760515
chr17 41527814 41528588 ZBTB33 GTRD no Lung (A549) 21760516
chr17 41527823 41528530 ZNF274 GTRD no Cervix (HeLa-S3) 21760517
chr17 41527917 41528786 ZNF274 GTRD no Liver (HepG2) 21760518
chr17 41527931 41528868 ZNF143 GTRD no Epithelial (MCF-7) 21760519
chr17 41527939 41528644 ZNF143 GTRD no Epithelial (MCF-7) 21760520
chr17 41527990 41528890 ZNF274 GTRD no Liver (HepG2) 21760521
chr17 41527997 41528001 YY1 TRANSFAC yes 54348285
Genes associated with rs540087285[chr17:41528001], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More