EnhancerDB
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  3. rs540087838[chr3:176909985]
Enhancers that have rs540087838[chr3:176909985]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 176893264 176911265 enh7692
Skin (Keratinocyte) Liver (HepG2) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Heart
Transcript factors that have rs540087838[chr3:176909985]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 176909981 176909993 GLI2 JASPAR yes 7844137
chr3 176909982 176909994 TAL1 JASPAR yes 7844138
chr3 176909983 176909993 MAX JASPAR yes 7844139
chr3 176909983 176909994 USF1 JASPAR yes 7844140
chr3 176909983 176909994 USF2 JASPAR yes 7844141
chr3 176909984 176909994 NEUROD2 JASPAR yes 7844142
Genes associated with rs540087838[chr3:176909985], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More