EnhancerDB
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  3. rs540144481[chr1:205268355]
Enhancers that have rs540144481[chr1:205268355]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205259785 205270135 enh12589
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs540144481[chr1:205268355]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205266432 205268724 ZNF274 GTRD no Bone Marrow (K562) 107861711
chr1 205267151 205268432 ZNF274 GTRD no Bone Marrow (K562) 107861732
chr1 205267367 205268397 ZNF143 GTRD no Epithelial (MCF-7) 107861739
chr1 205267409 205268399 ZNF143 GTRD no Epithelial (MCF-7) 107861741
chr1 205268351 205268356 SP1 TRANSFAC yes 34753247
Genes associated with rs540144481[chr1:205268355], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More