EnhancerDB
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  3. rs540149979[chr16:25009775]
Enhancers that have rs540149979[chr16:25009775]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 24992965 25014102 enh3954
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs540149979[chr16:25009775]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 25009769 25009789 ESR1 JASPAR yes 10093986
chr16 25009773 25009790 ESR1 JASPAR yes 10093987
chr16 25009773 25009791 ESR2 JASPAR yes 10093988
chr16 25009774 25009789 ESR2 JASPAR yes 10093989
chr16 25009775 25009779 ESR1 TRANSFAC yes 10093990
Genes associated with rs540149979[chr16:25009775], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More