EnhancerDB
  1. Home
  2. SNP
  3. rs540159444[chr2:27928138]
Enhancers that have rs540159444[chr2:27928138]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 27922526 27936875 enh18375
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs540159444[chr2:27928138]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 27928126 27928142 POU4F2 JASPAR yes 72583053
chr2 27928130 27928143 POU3F3 JASPAR yes 72583054
Genes associated with rs540159444[chr2:27928138], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More