EnhancerDB
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  3. rs540174495[chr1:234667762]
Enhancers that have rs540174495[chr1:234667762]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234649189 234693444 enh991
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540174495[chr1:234667762]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234667479 234667792 ZNF143 GTRD no Epithelial (MCF-7) 21394100
chr1 234667569 234668711 ZNF274 GTRD no Blood (GM12878) 107880337
chr1 234667722 234668579 ZNF274 GTRD no Blood (GM12878) 107880338
chr1 234667737 234668977 ZNF143 GTRD no Epithelial (MCF-7) 21394101
chr1 234667737 234668977 ZNF143 GTRD no Epithelial (MCF-7) 107880339
chr1 234667737 234668977 ZNF143 GTRD no Epithelial (MCF-7) 107880340
chr1 234667745 234667766 IRF1 JASPAR yes 36284559
chr1 234667747 234667762 STAT2 JASPAR yes 36284560
chr1 234667750 234667765 FOXP1 JASPAR yes 36284561
chr1 234667751 234667766 FOXP1 JASPAR yes 36284562
chr1 234667752 234667767 FOXP1 JASPAR yes 36284563
chr1 234667752 234667773 IRF1 JASPAR yes 36284564
Genes associated with rs540174495[chr1:234667762], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More