EnhancerDB
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  3. rs540197462[chr6:11355059]
Enhancers that have rs540197462[chr6:11355059]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11352354 11376815 enh23022
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Large Intestine Esophagus Astrocyte Blood (GM12878) Stomach Placenta Thyroid Uterus Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs540197462[chr6:11355059]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11355043 11355060 RARA JASPAR yes 99878228
chr6 11355054 11355071 RARA JASPAR yes 99878229
Genes associated with rs540197462[chr6:11355059], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More