EnhancerDB
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  3. rs540200945[chr17:48971153]
Enhancers that have rs540200945[chr17:48971153]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48954425 48973436 enh32228
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs540200945[chr17:48971153]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48969611 48971268 AR GTRD no Prostate (PC-3) 21770307
chr17 48969807 48971160 ZNF274 GTRD no Bone Marrow (K562) 21770313
chr17 48969932 48973718 ZNF274 GTRD no Liver (HepG2) 21770314
chr17 48970042 48973634 ZNF274 GTRD no Liver (HepG2) 21770315
chr17 48970090 48973147 ZNF274 GTRD no Liver (HepG2) 21770316
chr17 48970092 48973408 ZNF274 GTRD no Liver (HepG2) 21770317
chr17 48970160 48973787 ZNF274 GTRD no Liver (HepG2) 21770321
chr17 48970221 48971916 ZNF274 GTRD no Liver (HepG2) 21770326
chr17 48970230 48973595 ZNF274 GTRD no Liver (HepG2) 21770327
chr17 48970289 48972967 ZNF274 GTRD no Liver (HepG2) 21770329
chr17 48970469 48971739 ZNF274 GTRD no Liver (HepG2) 21770332
chr17 48970502 48971181 ZNF274 GTRD no Liver (HepG2) 21770333
chr17 48970511 48971171 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21770334
chr17 48970599 48973175 ZNF274 GTRD no Liver (HepG2) 21770336
chr17 48970632 48971957 ZNF274 GTRD no Liver (HepG2) 21770337
chr17 48970687 48971337 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21770338
chr17 48970701 48971205 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21770339
chr17 48970704 48973209 ZNF274 GTRD no Liver (HepG2) 21770340
chr17 48970711 48972097 ZNF274 GTRD no Liver (HepG2) 21770342
chr17 48970749 48973180 TCF7L2 GTRD no Colon (HCT116) 21770343
chr17 48970790 48971406 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21770344
chr17 48970844 48971164 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21770347
chr17 48970849 48974611 ZNF143 GTRD no Epithelial (MCF-7) 21770348
chr17 48970849 48974611 ZNF143 GTRD no Epithelial (MCF-7) 21770349
chr17 48970859 48971403 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21770351
chr17 48970874 48971210 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21770352
chr17 48970922 48971432 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21770353
chr17 48970946 48971386 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21770354
chr17 48970951 48971347 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21770355
chr17 48970958 48973180 TCF7L2 GTRD no Colon (HCT116) 21770356
chr17 48970963 48971299 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21770357
chr17 48970965 48971305 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21770358
chr17 48970972 48971372 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21770359
chr17 48970975 48971239 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21770360
chr17 48970977 48971894 ZNF274 GTRD no Liver (HepG2) 21770361
chr17 48970982 48972343 TCF7L2 GTRD no Colon (HCT116) 21770362
chr17 48970986 48971362 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21770363
chr17 48970987 48971217 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21770364
chr17 48970993 48971217 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21770365
chr17 48970995 48971271 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21770366
chr17 48971002 48971883 ZNF274 GTRD no Liver (HepG2) 21770367
chr17 48971011 48972992 ZNF274 GTRD no Liver (HepG2) 21770368
chr17 48971012 48973062 TCF7L2 GTRD no Colon (HCT116) 21770369
chr17 48971015 48972720 TCF7L2 GTRD no Colon (HCT116) 21770370
chr17 48971026 48971771 ZNF274 GTRD no Liver (HepG2) 21770371
chr17 48971056 48971727 ZNF274 GTRD no Liver (HepG2) 21770372
chr17 48971068 48971328 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21770373
chr17 48971076 48971780 ZNF274 GTRD no Liver (HepG2) 21770374
chr17 48971090 48971695 ZNF274 GTRD no Liver (HepG2) 21770375
chr17 48971093 48971924 ZNF274 GTRD no Liver (HepG2) 21770376
chr17 48971100 48973165 ZNF274 GTRD no Liver (HepG2) 21770377
chr17 48971102 48971765 ZNF274 GTRD no Liver (HepG2) 21770378
chr17 48971119 48972853 TCF7L2 GTRD no Colon (HCT116) 21770379
chr17 48971124 48971759 ZNF274 GTRD no Liver (HepG2) 21770380
chr17 48971134 48971972 ZNF274 GTRD no Liver (HepG2) 21770381
chr17 48971145 48972010 ZNF274 GTRD no Liver (HepG2) 21770382
chr17 48971147 48972899 ZNF274 GTRD no Liver (HepG2) 21770383
chr17 48971150 48971671 ZNF143 GTRD no Epithelial (MCF-7) 21770384
Genes associated with rs540200945[chr17:48971153], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More