EnhancerDB
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  3. rs540213680[chr2:102329567]
Enhancers that have rs540213680[chr2:102329567]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 102318065 102395755 enh5746
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540213680[chr2:102329567]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 102329557 102329568 CEBPB JASPAR yes 75829716
chr2 102329557 102329570 ATF4 JASPAR yes 75829717
chr2 102329558 102329571 JUN JASPAR yes 75829718
Genes associated with rs540213680[chr2:102329567], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More