EnhancerDB
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  3. rs540243012[chr17:55562817]
Enhancers that have rs540243012[chr17:55562817]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55530146 55569915 enh4488
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs540243012[chr17:55562817]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55562806 55562820 POU1F1 JASPAR yes 54960308
chr17 55562817 55562823 GATA3 JASPAR yes 54960310
Genes associated with rs540243012[chr17:55562817], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More