EnhancerDB
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  3. rs540245048[chr16:85648817]
Enhancers that have rs540245048[chr16:85648817]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85640485 85664563 enh16874
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Liver Stomach Muscle (A673) Placenta Embryonic Stem Cell Line (H1-hESC) Pancreas Muscle (Myotube) Uterus Blood (T-cell) Heart
chr16 85648720 85648939 vista23334
VISTA
Transcript factors that have rs540245048[chr16:85648817]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85643905 85651250 POLR2A UCSC Txn Factor no Conserved 108216765
chr16 85643905 85651250 POLR2A UCSC Txn Factor no Conserved 108216766
chr16 85646117 85649148 TCF7L2 GTRD no Colon (HCT116) 108216767
chr16 85646186 85655686 TCF7L2 GTRD no Colon (HCT116) 108216768
chr16 85646186 85655686 TCF7L2 GTRD no Colon (HCT116) 108216769
chr16 85646208 85651068 TCF7L2 GTRD no Colon (HCT116) 108216770
chr16 85646208 85651068 TCF7L2 GTRD no Colon (HCT116) 108216771
chr16 85646299 85655064 TCF7L2 GTRD no Colon (HCT116) 108216772
chr16 85646299 85655064 TCF7L2 GTRD no Colon (HCT116) 108216773
chr16 85647455 85651063 ZNF143 GTRD no Epithelial (MCF-7) 21730782
chr16 85647455 85651063 ZNF143 GTRD no Epithelial (MCF-7) 108216774
chr16 85647455 85651063 ZNF143 GTRD no Epithelial (MCF-7) 108216775
chr16 85647842 85649434 ZNF143 GTRD no Epithelial (MCF-7) 21730783
chr16 85647842 85649434 ZNF143 GTRD no Epithelial (MCF-7) 108216776
chr16 85648050 85650153 ZNF274 GTRD no Bone Marrow (K562) 21730784
chr16 85648050 85650153 ZNF274 GTRD no Bone Marrow (K562) 108216777
chr16 85648144 85649198 TCF7L2 GTRD no Colon (HCT116) 108216778
chr16 85648181 85648961 TCF7L2 GTRD no Colon (HCT116) 108216779
chr16 85648569 85648919 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21730785
chr16 85648569 85648919 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108216781
chr16 85648583 85648979 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108216782
chr16 85648596 85648892 ZNF274 GTRD no Bone Marrow (K562) 21730786
chr16 85648596 85648892 ZNF274 GTRD no Bone Marrow (K562) 108216783
chr16 85648603 85649101 TCF7L2 GTRD no Colon (HCT116) 108216784
chr16 85648604 85648868 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108216785
chr16 85648609 85649029 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21730787
chr16 85648609 85649029 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108216786
chr16 85648613 85649013 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21730788
chr16 85648613 85649013 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108216787
chr16 85648620 85648844 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21730789
chr16 85648620 85648844 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108216788
chr16 85648620 85648882 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21730790
chr16 85648620 85648882 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108216789
chr16 85648637 85649037 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21730791
chr16 85648637 85649037 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108216790
chr16 85648639 85648965 MYC UCSC Txn Factor no Conserved 108216791
chr16 85648650 85649106 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21730792
chr16 85648650 85649106 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108216792
chr16 85648657 85649033 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108216793
chr16 85648661 85648997 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21730793
chr16 85648661 85648997 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108216794
chr16 85648662 85648992 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21730794
chr16 85648662 85648992 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108216795
chr16 85648666 85648982 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21730795
chr16 85648666 85648982 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108216796
chr16 85648667 85648937 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108216797
chr16 85648667 85649176 ZNF274 GTRD no Bone Marrow (K562) 21730796
chr16 85648667 85649176 ZNF274 GTRD no Bone Marrow (K562) 108216798
chr16 85648668 85649044 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21730797
chr16 85648668 85649044 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108216799
chr16 85648670 85648986 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21730798
chr16 85648670 85648986 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108216800
chr16 85648672 85648910 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108216801
chr16 85648674 85648954 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108216802
chr16 85648678 85648868 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21730799
chr16 85648678 85648868 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108216803
chr16 85648681 85648957 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21730800
chr16 85648681 85648957 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108216804
chr16 85648684 85648944 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21730801
chr16 85648684 85648944 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108216805
chr16 85648691 85649130 ZNF274 GTRD no Bone Marrow (K562) 21730802
chr16 85648691 85649130 ZNF274 GTRD no Bone Marrow (K562) 108216806
chr16 85648693 85648933 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21730803
chr16 85648693 85648933 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108216807
chr16 85648706 85649146 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21730804
chr16 85648706 85649146 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108216808
chr16 85648711 85648853 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21730805
chr16 85648711 85648853 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108216809
chr16 85648729 85648914 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21730806
chr16 85648729 85648914 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108216810
chr16 85648755 85649191 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21730807
chr16 85648755 85649191 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108216811
chr16 85648811 85648824 SCRT2 JASPAR yes 12084145
chr16 85648811 85648824 SCRT2 JASPAR yes 49409857
chr16 85648811 85648826 SCRT1 JASPAR yes 12084146
chr16 85648811 85648826 SCRT1 JASPAR yes 49409858
chr16 85648817 85648826 ZEB1 JASPAR yes 12084147
chr16 85648817 85648826 ZEB1 JASPAR yes 49409859
Genes associated with rs540245048[chr16:85648817], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More