EnhancerDB
  1. Home
  2. SNP
  3. rs540248152[chr17:65420639]
Enhancers that have rs540248152[chr17:65420639]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65392925 65424130 enh17321
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs540248152[chr17:65420639]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65420623 65420644 REST JASPAR yes 55501849
chr17 65420624 65420643 REST JASPAR yes 55501850
chr17 65420635 65420647 ZBTB7B JASPAR yes 55501852
chr17 65420635 65420647 ZBTB7C JASPAR yes 55501853
chr17 65420636 65420648 ZBTB7A JASPAR yes 55501854
chr17 65420638 65420643 SP1 TRANSFAC yes 55501855
Genes associated with rs540248152[chr17:65420639], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More