EnhancerDB
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  3. rs540250712[chr1:8129106]
Enhancers that have rs540250712[chr1:8129106]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8113937 8146415 enh11460
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs540250712[chr1:8129106]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8129087 8129108 IRF1 JASPAR yes 26507847
chr1 8129091 8129112 IRF1 JASPAR yes 26507852
chr1 8129092 8129107 FOXP1 JASPAR yes 26507853
chr1 8129092 8129113 IRF1 JASPAR yes 26507854
chr1 8129093 8129114 IRF1 JASPAR yes 26507855
chr1 8129094 8129109 FOXP1 JASPAR yes 26507856
chr1 8129096 8129111 FOXP1 JASPAR yes 26507857
chr1 8129097 8129112 FOXP1 JASPAR yes 26507858
chr1 8129098 8129113 FOXP1 JASPAR yes 26507859
chr1 8129098 8129118 RREB1 JASPAR yes 26507860
chr1 8129098 8129119 IRF1 JASPAR yes 26507861
chr1 8129099 8129120 IRF1 JASPAR yes 26507862
chr1 8129100 8129115 FOXP1 JASPAR yes 26507863
chr1 8129104 8129125 IRF1 JASPAR yes 26507864
chr1 8129105 8129111 TCF4 TRANSFAC yes 26507865
chr1 8129105 8129120 FOXP1 JASPAR yes 26507866
chr1 8129106 8129117 FOXP2 JASPAR yes 26507867
chr1 8129106 8129118 FOXC2 JASPAR yes 26507868
chr1 8129106 8129121 STAT2 JASPAR yes 26507869
Genes associated with rs540250712[chr1:8129106], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More