EnhancerDB
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  3. rs540264785[chr5:172439529]
Enhancers that have rs540264785[chr5:172439529]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172432905 172446573 enh22818
Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs540264785[chr5:172439529]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172439515 172439529 PLAG1 JASPAR yes 67847940
chr5 172439523 172439532 THAP1 JASPAR yes 67847943
chr5 172439526 172439530 LFA1 TRANSFAC yes 67847944
Genes associated with rs540264785[chr5:172439529], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More