EnhancerDB
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  3. rs540274205[chr8:126324648]
Enhancers that have rs540274205[chr8:126324648]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr8 126278965 126330735 enh10519
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540274205[chr8:126324648]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr8 126324639 126324656 RARA JASPAR yes 48189206
chr8 126324639 126324656 RXRA JASPAR yes 48189207
chr8 126324646 126324656 RORA JASPAR yes 48189209
chr8 126324647 126324658 ESRRA JASPAR yes 48189210
chr8 126324647 126324658 ESRRB JASPAR yes 48189211
chr8 126324647 126324660 NR2F1 JASPAR yes 48189212
Genes associated with rs540274205[chr8:126324648], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More