EnhancerDB
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  3. rs540286364[chr5:172278665]
Enhancers that have rs540286364[chr5:172278665]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540286364[chr5:172278665]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172278659 172278669 SP1 JASPAR yes 67834760
chr5 172278659 172278674 NR2C2 JASPAR yes 67834761
chr5 172278662 172278667 SP1 TRANSFAC yes 67834762
chr5 172278662 172278672 ZNF740 JASPAR yes 67834763
chr5 172278663 172278673 SP1 JASPAR yes 67834764
chr5 172278663 172278673 ZNF740 JASPAR yes 67834765
Genes associated with rs540286364[chr5:172278665], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More