EnhancerDB
  1. Home
  2. SNP
  3. rs540288730[chr12:65060879]
Enhancers that have rs540288730[chr12:65060879]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65039765 65087550 enh2405
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540288730[chr12:65060879]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65060875 65060885 ZNF740 JASPAR yes 121423526
chr12 65060877 65060887 SP1 JASPAR yes 121423527
chr12 65060877 65060887 ZNF740 JASPAR yes 121423528
Genes associated with rs540288730[chr12:65060879], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More