EnhancerDB
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  3. rs540289793[chr11:122560958]
Enhancers that have rs540289793[chr11:122560958]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 122527985 122597555 enh2064
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs540289793[chr11:122560958]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 122560947 122560958 FOXB1 JASPAR yes 42020023
chr11 122560948 122560959 FOXB1 JASPAR yes 42020025
chr11 122560950 122560958 FOXL1 JASPAR yes 42020026
chr11 122560955 122560966 PHOX2A JASPAR yes 42020027
chr11 122560956 122560961 GATA2 JASPAR yes 42020028
chr11 122560958 122560968 ALX3 JASPAR yes 42020029
Genes associated with rs540289793[chr11:122560958], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More