EnhancerDB
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  3. rs540294731[chr17:43387491]
Enhancers that have rs540294731[chr17:43387491]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43363305 43400878 enh4428
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs540294731[chr17:43387491]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43386787 43387549 ZNF274 GTRD no Cervix (HeLa-S3) 21764403
chr17 43386887 43390033 ZNF274 GTRD no Blood (GM12878) 21764407
chr17 43386887 43390033 ZNF274 GTRD no Blood (GM12878) 108264461
chr17 43386965 43389907 ZNF274 GTRD no Bone Marrow (K562) 21764409
chr17 43386965 43389907 ZNF274 GTRD no Bone Marrow (K562) 108264462
chr17 43387058 43390224 ZNF274 GTRD no Cervix (HeLa-S3) 21764410
chr17 43387058 43390224 ZNF274 GTRD no Cervix (HeLa-S3) 108264463
chr17 43387182 43390265 ZBTB33 GTRD no Lung (A549) 108264464
chr17 43387323 43389910 ZNF274 GTRD no Liver (HepG2) 21764413
chr17 43387323 43389910 ZNF274 GTRD no Liver (HepG2) 108264465
chr17 43387336 43387612 ZNF274 GTRD no Blood (GM12878) 21764414
chr17 43387391 43389511 TCF7L2 GTRD no Colon (HCT116) 21764415
chr17 43387391 43389511 TCF7L2 GTRD no Colon (HCT116) 108264466
chr17 43387399 43390071 ZNF274 GTRD no Bone Marrow (K562) 21764416
chr17 43387399 43390071 ZNF274 GTRD no Bone Marrow (K562) 108264467
chr17 43387467 43390144 ZBTB33 GTRD no Lung (A549) 108264468
chr17 43387470 43387491 ZNF263 JASPAR yes 54442869
chr17 43387478 43389890 ZNF274 GTRD no Bone Marrow (K562) 21764417
chr17 43387478 43389890 ZNF274 GTRD no Bone Marrow (K562) 108264469
chr17 43387480 43389952 ZNF274 GTRD no Blood (GM12878) 21764418
chr17 43387480 43389952 ZNF274 GTRD no Blood (GM12878) 108264470
chr17 43387489 43389829 TCF7L2 GTRD no Colon (HCT116) 21764419
chr17 43387489 43389829 TCF7L2 GTRD no Colon (HCT116) 108264471
Genes associated with rs540294731[chr17:43387491], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More