EnhancerDB
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  3. rs540296602[chr5:79475135]
Enhancers that have rs540296602[chr5:79475135]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 79474525 79496555 enh22393
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs540296602[chr5:79475135]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 79475121 79475136 STAT2 JASPAR yes 63702221
chr5 79475122 79475137 FOXP1 JASPAR yes 63702222
chr5 79475122 79475143 IRF1 JASPAR yes 63702223
chr5 79475123 79475144 IRF1 JASPAR yes 63702225
chr5 79475124 79475135 FOXC1 JASPAR yes 63702226
chr5 79475124 79475136 FOXC2 JASPAR yes 63702227
chr5 79475124 79475139 IRF9 JASPAR yes 63702228
chr5 79475125 79475136 FOXP2 JASPAR yes 63702229
chr5 79475125 79475139 IRF7 JASPAR yes 63702230
chr5 79475126 79475141 STAT2 JASPAR yes 63702231
chr5 79475127 79475136 SRY JASPAR yes 63702232
chr5 79475127 79475139 IRF1 JASPAR yes 63702233
chr5 79475128 79475143 MEF2C JASPAR yes 63702234
chr5 79475129 79475144 MEF2A JASPAR yes 63702235
chr5 79475132 79475146 FOXF2 JASPAR yes 63702236
chr5 79475132 79475147 FOXP1 JASPAR yes 63702237
chr5 79475133 79475144 FOXA1 JASPAR yes 63702238
chr5 79475133 79475148 FOXA1 JASPAR yes 63702239
chr5 79475134 79475145 FOXB1 JASPAR yes 63702240
chr5 79475134 79475145 FOXC1 JASPAR yes 63702241
chr5 79475134 79475146 FOXC2 JASPAR yes 63702242
chr5 79475135 79475146 FOXP2 JASPAR yes 63702243
chr5 79475135 79475147 FOXI1 JASPAR yes 63702244
chr5 79475135 79475149 ONECUT3 JASPAR yes 63702245
Genes associated with rs540296602[chr5:79475135], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More