EnhancerDB
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  3. rs540297025[chr16:69088923]
Enhancers that have rs540297025[chr16:69088923]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 69081060 69101258 enh31894
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Colon (HCT116) Thyroid Uterus Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs540297025[chr16:69088923]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 69088917 69088923 NFIC JASPAR yes 11243422
chr16 69088919 69088923 H1TF2 TRANSFAC yes 11243423
chr16 69088919 69088923 NFE TRANSFAC yes 11243424
chr16 69088919 69088923 SRF TRANSFAC yes 11243425
chr16 69088922 69088937 FOXP1 JASPAR yes 11243426
chr16 69088923 69088938 FOXP1 JASPAR yes 11243427
Genes associated with rs540297025[chr16:69088923], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More