EnhancerDB
  1. Home
  2. SNP
  3. rs540320933[chr1:16122817]
Enhancers that have rs540320933[chr1:16122817]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16111145 16132915 enh11541
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs540320933[chr1:16122817]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16122816 16122831 FOXP1 JASPAR yes 27002322
chr1 16122817 16122838 IRF1 JASPAR yes 27002323
Genes associated with rs540320933[chr1:16122817], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More