EnhancerDB
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  3. rs540341621[chr19:4368850]
Enhancers that have rs540341621[chr19:4368850]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4365204 4379535 enh4970
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540341621[chr19:4368850]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4367290 4371194 ZNF274 GTRD no Blood (GM12878) 21840839
chr19 4367290 4371194 ZNF274 GTRD no Blood (GM12878) 108370902
chr19 4367394 4372021 ZNF274 GTRD no Blood (GM12878) 21840840
chr19 4367394 4372021 ZNF274 GTRD no Blood (GM12878) 108370903
chr19 4367487 4371346 ZNF274 GTRD no Blood (GM12878) 21840841
chr19 4367487 4371346 ZNF274 GTRD no Blood (GM12878) 108370904
chr19 4367660 4370827 ZNF274 GTRD no Blood (GM12878) 21840842
chr19 4367660 4370827 ZNF274 GTRD no Blood (GM12878) 108370905
chr19 4367780 4369727 ZNF274 GTRD no Blood (GM12878) 21840843
chr19 4367780 4369727 ZNF274 GTRD no Blood (GM12878) 108370906
chr19 4367981 4371413 ZNF274 GTRD no Blood (GM12878) 21840844
chr19 4367981 4371413 ZNF274 GTRD no Blood (GM12878) 108370907
chr19 4368783 4370498 STAT3 GTRD no Blood (OCI-LY7) 21840845
chr19 4368783 4370498 STAT3 GTRD no Blood (OCI-LY7) 108370908
chr19 4368844 4368859 JUND JASPAR yes 112168982
chr19 4368844 4371208 TCF7L2 GTRD no Colon (HCT116) 21840846
chr19 4368844 4371208 TCF7L2 GTRD no Colon (HCT116) 108370909
chr19 4368845 4368858 JUN JASPAR yes 112168983
chr19 4368848 4368861 NR2F1 JASPAR yes 112168984
chr19 4368849 4368857 CREB1 JASPAR yes 112168985
Genes associated with rs540341621[chr19:4368850], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More