EnhancerDB
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  3. rs540360498[chr1:212766638]
Enhancers that have rs540360498[chr1:212766638]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212765205 212784697 enh12647
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs540360498[chr1:212766638]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212766619 212766639 RREB1 JASPAR yes 35139051
chr1 212766622 212766642 RREB1 JASPAR yes 35139052
chr1 212766623 212766640 ZNF410 JASPAR yes 35139053
chr1 212766626 212766646 RREB1 JASPAR yes 35139054
chr1 212766626 212766647 ZNF263 JASPAR yes 35139055
chr1 212766629 212766649 RREB1 JASPAR yes 35139056
chr1 212766630 212766650 RREB1 JASPAR yes 35139057
chr1 212766631 212766652 ZNF263 JASPAR yes 35139058
chr1 212766634 212766639 SP1 TRANSFAC yes 35139059
chr1 212766634 212766655 ZNF263 JASPAR yes 35139060
chr1 212766635 212766645 ZNF740 JASPAR yes 35139061
chr1 212766636 212766651 NR2C2 JASPAR yes 35139062
chr1 212766637 212766647 SP1 JASPAR yes 35139063
chr1 212766638 212766647 SP1 TRANSFAC yes 35139064
chr1 212766638 212766648 SP1 JASPAR yes 35139065
chr1 212766638 212766659 ZNF263 JASPAR yes 35139066
Genes associated with rs540360498[chr1:212766638], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More