EnhancerDB
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  3. rs540384288[chr6:112293099]
Enhancers that have rs540384288[chr6:112293099]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 112291245 112321335 enh23518
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen
chr6 112292948 112293337 vista53163
VISTA
Transcript factors that have rs540384288[chr6:112293099]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 112292776 112293104 MAFK UCSC Txn Factor no Conserved 108541347
chr6 112293091 112293111 TBX19 JASPAR yes 70419296
chr6 112293091 112293111 TBX19 JASPAR yes 104392366
chr6 112293093 112293109 T JASPAR yes 70419297
chr6 112293093 112293109 T JASPAR yes 104392367
chr6 112293095 112293115 TP63 JASPAR yes 70419298
chr6 112293095 112293115 TP63 JASPAR yes 104392368
chr6 112293096 112293114 TP53 JASPAR yes 70419299
chr6 112293096 112293114 TP53 JASPAR yes 104392369
chr6 112293098 112293113 TP53 JASPAR yes 70419300
chr6 112293098 112293113 TP53 JASPAR yes 104392370
Genes associated with rs540384288[chr6:112293099], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More