EnhancerDB
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  3. rs540384505[chr3:185487618]
Enhancers that have rs540384505[chr3:185487618]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 185460642 185522464 enh21175
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540384505[chr3:185487618]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 185487616 185487631 FOXP1 JASPAR yes 8286883
chr3 185487617 185487632 FOXP1 JASPAR yes 8286884
chr3 185487617 185487638 IRF1 JASPAR yes 8286885
chr3 185487618 185487633 FOXP1 JASPAR yes 8286886
chr3 185487618 185487639 IRF1 JASPAR yes 8286887
Genes associated with rs540384505[chr3:185487618], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More