EnhancerDB
  1. Home
  2. SNP
  3. rs540392127[chr14:55569709]
Enhancers that have rs540392127[chr14:55569709]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 55550545 55578795 enh15631
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs540392127[chr14:55569709]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 55569551 55570181 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21620071
chr14 55569551 55570181 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108103653
chr14 55569584 55570208 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21620072
chr14 55569584 55570208 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108103654
chr14 55569590 55570110 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21620073
chr14 55569590 55570110 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108103655
chr14 55569591 55570187 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21620074
chr14 55569591 55570187 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108103656
chr14 55569595 55570528 POLR2A UCSC Txn Factor no Conserved 108103657
chr14 55569608 55570044 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21620075
chr14 55569608 55570044 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108103658
chr14 55569617 55570027 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21620076
chr14 55569617 55570027 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108103659
chr14 55569625 55570005 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21620077
chr14 55569625 55570005 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108103660
chr14 55569670 55570186 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21620078
chr14 55569670 55570186 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108103661
chr14 55569677 55570167 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108103662
chr14 55569687 55570017 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21620079
chr14 55569687 55570017 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108103663
chr14 55569688 55569964 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21620080
chr14 55569688 55569964 RUNX3 UCSC Txn Factor no Conserved 108103664
chr14 55569688 55569964 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108103665
chr14 55569688 55570144 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21620081
chr14 55569688 55570144 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108103666
chr14 55569695 55570005 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21620082
chr14 55569695 55570005 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108103667
chr14 55569698 55570054 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108103668
chr14 55569699 55570275 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21620083
chr14 55569699 55570275 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108103669
chr14 55569707 55569721 TCF7L2 JASPAR yes 115529887
chr14 55569707 55569722 HNF4G JASPAR yes 115529888
chr14 55569707 55569722 LEF1 JASPAR yes 115529889
chr14 55569708 55569722 NR2F1 JASPAR yes 115529890
chr14 55569708 55569723 HNF4A JASPAR yes 115529891
chr14 55569708 55569972 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21620084
chr14 55569708 55569972 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108103670
Genes associated with rs540392127[chr14:55569709], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More