EnhancerDB
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  3. rs540392804[chr5:159583879]
Enhancers that have rs540392804[chr5:159583879]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 159580425 159605208 enh22765
Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540392804[chr5:159583879]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 159583868 159583881 ZBTB18 JASPAR yes 67344008
chr5 159583870 159583880 ID4 JASPAR yes 67344009
chr5 159583870 159583880 TCF3 JASPAR yes 67344010
chr5 159583870 159583880 TCF4 JASPAR yes 67344011
chr5 159583872 159583881 ZEB1 JASPAR yes 67344012
chr5 159583873 159583881 TBX5 JASPAR yes 67344013
Genes associated with rs540392804[chr5:159583879], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More