EnhancerDB
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  3. rs540393975[chr12:122587750]
Enhancers that have rs540393975[chr12:122587750]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122578829 122604895 enh2657
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs540393975[chr12:122587750]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122587742 122587750 FOXL1 JASPAR yes 124265904
chr12 122587742 122587757 FOXA1 JASPAR yes 124265905
chr12 122587743 122587755 FOXI1 JASPAR yes 124265906
chr12 122587743 122587758 FOXP1 JASPAR yes 124265907
chr12 122587744 122587756 FOXC2 JASPAR yes 124265908
chr12 122587744 122587758 ONECUT3 JASPAR yes 124265909
chr12 122587745 122587756 FOXB1 JASPAR yes 124265910
chr12 122587745 122587756 FOXC1 JASPAR yes 124265911
chr12 122587745 122587761 POU4F2 JASPAR yes 124265912
chr12 122587745 122587761 POU4F3 JASPAR yes 124265913
chr12 122587746 122587750 YY1 TRANSFAC yes 124265914
chr12 122587746 122587761 FOXA1 JASPAR yes 124265915
chr12 122587747 122587759 FOXI1 JASPAR yes 124265916
chr12 122587747 122587761 POU4F1 JASPAR yes 124265917
chr12 122587747 122587762 FOXP1 JASPAR yes 124265918
chr12 122587747 122587762 HNF1A JASPAR yes 124265919
chr12 122587748 122587760 FOXC2 JASPAR yes 124265920
chr12 122587748 122587762 ONECUT2 JASPAR yes 124265921
chr12 122587748 122587762 ONECUT3 JASPAR yes 124265922
chr12 122587749 122587760 FOXB1 JASPAR yes 124265923
chr12 122587749 122587760 FOXC1 JASPAR yes 124265924
chr12 122587749 122587760 PROP1 JASPAR yes 124265925
chr12 122587749 122587765 POU4F2 JASPAR yes 124265926
chr12 122587749 122587765 POU4F3 JASPAR yes 124265927
chr12 122587750 122587754 YY1 TRANSFAC yes 124265928
chr12 122587750 122587765 FOXA1 JASPAR yes 124265929
Genes associated with rs540393975[chr12:122587750], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More